Publications

Yuan Li, Biaoyan Fang, Jiayuan He, Hiyori Yoshikawa, Saber A. Akhondi, Christian Druckenbrodt, Camilo Thorne, Zenan Zhai, Zubair Afzal, Trevor Cohn, Timothy Baldwin and Karin Verspoor (2022) The ChEMU 2022 Evaluation Campaign: Information Extraction in Chemical Patents. In Proceedings of the 44rd European Conference on Information Retrieval (ECIR 2022), Stavanger, Norway. [Link to Springer|More info]

Biaoyan Fang* and Fajri Koto* (2022) Context-Aware Sentence Classification in Evidence-Based Medicine. In Proceedings of the Australasian Language Technology Association Workshop 2022 (ALTA 2022), Adelaide, Australia. [Link to Paper|More info]

Biaoyan Fang, Christian Druckenbrodt, Saber A Akhondi, Jiayuan He, Timothy Baldwin and Karin Verspoor (2021) ChEMU-Ref: A Corpus for Modeling Anaphora Resolution in the Chemical Domain. In Proceedings of the 16th Conference of the European Chapter of the Association for Computational Linguistics (EACL2021), virtual conference, pp. 1362–1375. [Link to ACL anthology|More info]

Karin Verspoor, Simon Šuster, Yulia Otmakhova, Shevon Mendis, Zenan Zhai, Biaoyan Fang, Jey Han Lau, Timothy Baldwin, Antonio Jimeno-Yepes and David Martinez (2021) Brief Description of COVID-SEE: The Scientific Evidence Explorer for COVID-19 Related Research. In Proceedings of the 43rd European Conference on Information Retrieval (ECIR 2021), virtual conference [Link to Springer|More info]

Jiayuan He, Biaoyan Fang, Hiyori Yoshikawa, Saber A. Akhondi, Christian Druckenbrodt, Camilo Thorne, Zubair Afzal, Zenan Zhai, Lawrence Cavedon, Trevor Cohn, Timothy Baldwin and Karin Verspoor (2021) ChEMU 2021: Reaction Reference Resolution and Anaphora Resolution in Chemical Patents. In Proceedings of the 43rd European Conference on Information Retrieval (ECIR 2021), virtual conference [Link to Springer|More info]

Jiayuan He, Dat Quoc Nguyen, Saber A. Akhondi, Christian Druckenbrodt, Camilo Thorne, Ralph Hoessel, Zubair Afzal, Zenan Zhai, Biaoyan Fang, Hiyori Yoshikawa, Ameer Albahem, Lawrence Cavedon, Trevor Cohn, Timothy Baldwin and Karin Verspoor (2021) ChEMU 2020: Natural Language Processing Methods Are Effective for Information Extraction From Chemical Patents. Frontiers in Research Metrics and Analytics 6 [Link to Frontiers|More info]

Fajri Koto* and Biaoyan Fang* (2021) Handling Variance of Pretrained Language Models in Grading Evidence in the Medical Literature. In Proceedings of the Australasian Language Technology Association Workshop 2021 (ALTA 2021), virtual. [Link to Paper|More info]

Jiayuan He, Dat Quoc Nguyen, Saber A. Akhondi, Christian Druckenbrodt, Camilo Thorne, Ralph Hoessel, Zubair Afzal, Zenan Zhai, Biaoyan Fang, Hiyori Yoshikawa, Ameer Albahem, Lawrence Cavedon, Trevor Cohn, Timothy Baldwin, Karin Verspoor (2020) Overview of ChEMU 2020: Named Entity Recognition and Event Extraction of Chemical Reactions from Patents. In Proceedings of CLEF 2020: 237—254. [Link to Springer|More info]

Dat Quoc Nguyen, Zenan Zhai, Hiyori Yoshikawa, Biaoyan Fang, Christian Druckenbrodt, Camilo Thorne, Ralph Hoessel, Saber A. Akhondi, Trevor Cohn, Timothy Baldwin and Karin Verspoor (2020) ChEMU: Named Entity Recognition and Event Extraction of Chemical Reactions from Patents. In Proceedings of the 42rd European Conference on Information Retrieval (ECIR 2020), Lisbon, Portugal. [Link to Springer|More info]

Datasets

Biaoyan Fang, Christian Druckenbrodt, Saber A. Akhondi, Camilo Thorne, Timothy Baldwin, Karin Verspoor (2022) RecipeRef Corpus for Modeling Anaphora Resolution from the Procedural Text of Recipes. Mendeley Data [Link to Mendeley Data|More info]

Biaoyan Fang, Christian Druckenbrodt, Colleen Yeow Hui Shiuan, Sacha Novakovic, Ralph Hössel, Saber A. Akhondi, Jiayuan He, Meladel Mistica, Timothy Baldwin, Karin Verspoor (2021) ChEMU-Ref dataset for Modeling Anaphora Resolution in the Chemical Domain. Mendeley Data [Link to Mendeley Data|More info]